Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015807132.1_cds_XP_016494694.1_9083
CDS Infomation

[gene=LOC107813892] [db_xref=GeneID:107813892] [protein=elongation factor Tu, mitochondrial] [protein_id=XP_016494694.1] [location=complement(join(24331..24401,26311..26551,26901..26963,27056..27118,27582..27665,28195..28400,28533..28623,28719..28823,30588..30662,30746..30838,31530..31605,32078..32262))] [gbkey=CDS]
Sequence

ATGGCATCGGTCGCTTTTAGAAATCCCAATTCGAAGCGCGTGTTCTCACTCTCTCCACAA
ATCTATTCGTGCTGTAGAGCAGGATCAGCTTCCACTCAGTTCTCACTCTCAGAGTCGCTA
AATGCAAATGAAACTCCCTCTTTTTCTAACCCTTGGTGGAGATCCATGGCCACTTTCACT
CGAACAAAACCTCATGTAAACGTGGGAACTATCGGCCACGTTGATCATGGAAAGACTACT
CTTACTGCCGCAATTACAAAGGTCCTAGCAGAAGAAGGAAAGGCCAAGGCCGTTGCATTT
GATGAAATTGATAAGGCCCCGGAAGAGAAAAAGAGAGGAATTACTATTGCCACAGCCCAT
GTGGAGTATGAGACGGTTAAAAGACACTATGCTCATGTTGATTGCCCAGGACACGCAGAT
TATGTTAAGAATATGATTACTGGAGCTGCCCAAATGGATGGTGGTATTCTAGTTGTATCC
GCTCCTGATGGACCCATGCCACAAACGAAGGAGCATATCTTGCTTGCACGCCAGGTTGGT
GTACCATCACTTGTCTGCTTTTTAAACAAAGTTGATGCTGTTGATGATCCTGAACTGCTG
GAACTTGTGGAGATGGAGCTTCGGGAACTGCTTAGTTTCTACAAGTTTCCTGGAGATGAA
ATTCCGATCATTCGTGGTTCAGCTCTTTCTGCTTTACAGGGAACTAACGAAGAAATTGGA
AAGAAAGCTATTTTAAAGTTAATGGAAGCTGTAGATGAATATATTCCTGATCCAGTGCGT
CAGCTTGACAAACCATTCTTAATGCCAGTAGAAGATGTATTCTCAATTCAGGGACGTGGA
ACTGTTGCTACTGGCCGTGTTGAACAGGGACAAATAAAAGTTGGAGATGATGTGGAGATC
TTAGGGCTGATGCAGGGCAATTTAAAATCTACAGTGACTGGTGTTGAAATGTTCAAGAAG
ATCTTGGATCATGGACAAGCTGGCGATAATGTCGGGCTTCTTCTCCGTGGATTGAAACGA
GAAGATATTACGCGAGGAATGGTGATTGCAAAGCCTGGTAGTGTGAAAACGTACAAGAAA
TTCGAGGCAGAGATATACGTACTAACAAAGGATGAAGGTGGTCGCCACACTGCTTTTTTC
TCAAATTATAGGCCTCAGTTCTACCTGAGGACTGCTGATATTACTGGTAAAGTGGAGTTG
CCTGAAAACGTCAAGATGGTTATGCCGGGGGATAACGTTACTGCTACTTTCGAGCTGATA
TCTCCAGTTCCTCTTGACGCAGGACAAAGATTTGCCCTGAGGGAGGGTGGCAGAACGGTT
GGTGCTGGGGTTGTTTCCAAGGTGCTGAGCTGA

Peptide Sequence

PEP ID

XP_016494694.1
PEP Infomation

PREDICTED: elongation factor Tu, mitochondrial [Nicotiana tabacum]
Sequence

MASVAFRNPNSKRVFSLSPQIYSCCRAGSASTQFSLSESLNANETPSFSNPWWRSMATFT
RTKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAVAFDEIDKAPEEKKRGITIATAH
VEYETVKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLARQVG
VPSLVCFLNKVDAVDDPELLELVEMELRELLSFYKFPGDEIPIIRGSALSALQGTNEEIG
KKAILKLMEAVDEYIPDPVRQLDKPFLMPVEDVFSIQGRGTVATGRVEQGQIKVGDDVEI
LGLMQGNLKSTVTGVEMFKKILDHGQAGDNVGLLLRGLKREDITRGMVIAKPGSVKTYKK
FEAEIYVLTKDEGGRHTAFFSNYRPQFYLRTADITGKVELPENVKMVMPGDNVTATFELI
SPVPLDAGQRFALREGGRTVGAGVVSKVLS

Transcript Sequence

Gene sequence data has not been registered.